Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
RARA

Cell type

Cell type Class
Blood
Cell type
UPR9
NA
NA

Attributes by original data submitter

Sample

source_name
UPR9 cells
agent
5 hours zinc
antibody
RAR

Sequenced DNA Library

library_name
RAR_ChIPseq_UPR9_5hrZinc_JM33
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
10711901
Reads aligned (%)
89.1
Duplicates removed (%)
4.9
Number of peaks
10894 (qval < 1E-05)

hg38

Number of total reads
10711901
Reads aligned (%)
89.9
Duplicates removed (%)
4.6
Number of peaks
10896 (qval < 1E-05)

Base call quality data from DBCLS SRA