SRX014777
GSM468207: H3K9me3 ChIPseq MR4 noATRA JM28

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K9K14ac

Cell type

Cell type Class
Blood
Cell type
MR4
NA
NA

Attributes by original data submitter

Sample

source_name
MR4 cells
agent
none
antibody
H3K9K14ac

Sequenced DNA Library

library_name
H3K9me3_ChIPseq_MR4_noATRA_JM28
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
14125561
Reads aligned (%)
97.5
Duplicates removed (%)
11.0
Number of peaks
32444 (qval < 1E-05)

hg19

Number of total reads
14125561
Reads aligned (%)
97.2
Duplicates removed (%)
11.1
Number of peaks
32336 (qval < 1E-05)

Base call quality data from DBCLS SRA