Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
RXRA

Cell type

Cell type Class
Blood
Cell type
Leukemia, Myeloid
MeSH Description
Form of leukemia characterized by an uncontrolled proliferation of the myeloid lineage and their precursors (MYELOID PROGENITOR CELLS) in the bone marrow and other sites.

Attributes by original data submitter

Sample

source_name
APL cells _pz74
agent
none
antibody
RXR

Sequenced DNA Library

library_name
RXR_ChIP-seq_APL74_noATRA_JM25
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
12730662
Reads aligned (%)
69.3
Duplicates removed (%)
17.9
Number of peaks
831 (qval < 1E-05)

hg38

Number of total reads
12730662
Reads aligned (%)
69.7
Duplicates removed (%)
17.6
Number of peaks
841 (qval < 1E-05)

Base call quality data from DBCLS SRA