Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
PML

Cell type

Cell type Class
Blood
Cell type
NB-4
Primary Tissue
Blood
Site of Extraction
Bone Marrow
Tissue Diagnosis
Leukemia

Attributes by original data submitter

Sample

source_name
NB4 cells
agent
24 hours ATRA
antibody
PML

Sequenced DNA Library

library_name
PML_ChIP-seq_NB4_24hoursATRA_JM19
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
7567340
Reads aligned (%)
64.4
Duplicates removed (%)
12.1
Number of peaks
375 (qval < 1E-05)

hg38

Number of total reads
7567340
Reads aligned (%)
65.6
Duplicates removed (%)
11.2
Number of peaks
174 (qval < 1E-05)

Base call quality data from DBCLS SRA