Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Blood
Cell type
Leukemia, Myeloid
MeSH Description
Form of leukemia characterized by an uncontrolled proliferation of the myeloid lineage and their precursors (MYELOID PROGENITOR CELLS) in the bone marrow and other sites.

Attributes by original data submitter

Sample

source_name
APL cells _pz164
agent
48 hours ATRA
antibody
H3K27me3

Sequenced DNA Library

library_name
H3K27me3_ChIP-seq_APL164_48hoursATRA_JM16
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg38

Number of total reads
9180677
Reads aligned (%)
92.7
Duplicates removed (%)
5.3
Number of peaks
81 (qval < 1E-05)

hg19

Number of total reads
9180677
Reads aligned (%)
92.2
Duplicates removed (%)
5.7
Number of peaks
109 (qval < 1E-05)

Base call quality data from DBCLS SRA