Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
RXRA

Cell type

Cell type Class
Blood
Cell type
Leukemia, Myeloid
MeSH Description
Form of leukemia characterized by an uncontrolled proliferation of the myeloid lineage and their precursors (MYELOID PROGENITOR CELLS) in the bone marrow and other sites.

Attributes by original data submitter

Sample

source_name
APL cells _pz164
agent
none
antibody
RXR

Sequenced DNA Library

library_name
RXR_ChIP-seq_APL164_noATRA, JM5
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
11774801
Reads aligned (%)
57.0
Duplicates removed (%)
23.7
Number of peaks
1534 (qval < 1E-05)

hg38

Number of total reads
11774801
Reads aligned (%)
58.5
Duplicates removed (%)
22.4
Number of peaks
1253 (qval < 1E-05)

Base call quality data from DBCLS SRA