SRX013107
GSM439461: E12-16 PolII ChIPSeq 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Embryo
Cell type
12-16h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E12-16
development point
E12-16
antibody
PolII
antibody manufacturer
Covance
antibody catalog number
MMS-126R
antibody lot number
14861301

Sequenced DNA Library

library_name
E12-16_PolII_ChIPSeq_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
8162056
Reads aligned (%)
96.8
Duplicates removed (%)
41.7
Number of peaks
4107 (qval < 1E-05)

dm3

Number of total reads
8162056
Reads aligned (%)
97.1
Duplicates removed (%)
40.6
Number of peaks
4551 (qval < 1E-05)

Base call quality data from DBCLS SRA