SRX013103
GSM439457: E0-4 H3K9Me3 ChIPSeq 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K9me3

Cell type

Cell type Class
Embryo
Cell type
0-4h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E0-4
development point
E0-4
antibody
H3K9me3
antibody manufacturer
Abcam
antibody catalog number
ab8898
antibody lot number
422485

Sequenced DNA Library

library_name
E0-4_H3K9Me3_ChIPSeq_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
4777271
Reads aligned (%)
84.8
Duplicates removed (%)
28.1
Number of peaks
4025 (qval < 1E-05)

dm3

Number of total reads
4777271
Reads aligned (%)
87.0
Duplicates removed (%)
21.0
Number of peaks
2072 (qval < 1E-05)

Base call quality data from DBCLS SRA