Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K9me3

Cell type

Cell type Class
Embryo
Cell type
8-12h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E8-12
development point
E8-12
antibody
H3K9me3
antibody manufacturer
Abcam
antibody catalog number
ab8898
antibody lot number
422485

Sequenced DNA Library

library_name
E8-12_H3K9Me3_ChIPSeq_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

dm6

Number of total reads
8403975
Reads aligned (%)
96.1
Duplicates removed (%)
17.1
Number of peaks
4112 (qval < 1E-05)

dm3

Number of total reads
8403975
Reads aligned (%)
97.6
Duplicates removed (%)
12.6
Number of peaks
1963 (qval < 1E-05)

Base call quality data from DBCLS SRA