SRX013089
GSM439443: E20-24 H3K27Me3 ChIPSeq 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Embryo
Cell type
20-24h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E20-24
development point
E20-24
antibody
H3K27me3
antibody manufacturer
Upstate
antibody catalog number
07-449
antibody lot number
DAM1387952

Sequenced DNA Library

library_name
E20-24_H3K27Me3_ChIPSeq_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
4024334
Reads aligned (%)
95.8
Duplicates removed (%)
6.1
Number of peaks
1642 (qval < 1E-05)

dm3

Number of total reads
4024334
Reads aligned (%)
96.0
Duplicates removed (%)
5.4
Number of peaks
1398 (qval < 1E-05)

Base call quality data from DBCLS SRA