Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me1

Cell type

Cell type Class
Embryo
Cell type
12-16h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E12-16
development point
E12-16
antibody
H3K4me1
antibody manufacturer
Abcam
antibody catalog number
ab8895
antibody lot number
349232

Sequenced DNA Library

library_name
E12-16_H3K4Me1_ChIPSeq_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

dm6

Number of total reads
6873870
Reads aligned (%)
91.7
Duplicates removed (%)
4.7
Number of peaks
5580 (qval < 1E-05)

dm3

Number of total reads
6873870
Reads aligned (%)
92.0
Duplicates removed (%)
4.1
Number of peaks
5655 (qval < 1E-05)

Base call quality data from DBCLS SRA