SRX013069
GSM432586: Pupae PolII ChIPSeq 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Pupae
Cell type
Pupae
NA
NA

Attributes by original data submitter

Sample

source_name
Pupae
development point
Pupae
antibody
PolII
antibody manufacturer
Covance
antibody catalog number
MMS-126R
antibody lot number
14861301

Sequenced DNA Library

library_name
Pupae_PolII_ChIPSeq_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm3

Number of total reads
7359017
Reads aligned (%)
81.7
Duplicates removed (%)
36.9
Number of peaks
6025 (qval < 1E-05)

dm6

Number of total reads
7359017
Reads aligned (%)
81.3
Duplicates removed (%)
37.6
Number of peaks
5811 (qval < 1E-05)

Base call quality data from DBCLS SRA