SRX013065
GSM432582: E12-16 H3K27Ac ChIPSeq 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Embryo
Cell type
12-16h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E12-16
development point
E12-16
antibody
H3K27Ac
antibody manufacturer
Abcam
antibody catalog number
ab4729
antibody lot number
34629

Sequenced DNA Library

library_name
E12-16_H3K27Ac_ChIPSeq_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
7018791
Reads aligned (%)
97.6
Duplicates removed (%)
7.5
Number of peaks
7262 (qval < 1E-05)

dm3

Number of total reads
7018791
Reads aligned (%)
97.8
Duplicates removed (%)
6.7
Number of peaks
7166 (qval < 1E-05)

Base call quality data from DBCLS SRA