SRX013057
GSM408992: L3 CBP ChIPSeq 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CBP

Cell type

Cell type Class
Larvae
Cell type
3rd instar
NA
NA

Attributes by original data submitter

Sample

source_name
L3
tissue/development stage
L3
antibody
CBP
antibody provider
Dr. Mattias Mannervik in Stockholm University

Sequenced DNA Library

library_name
L3_CBP_ChIPSeq_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm3

Number of total reads
4718133
Reads aligned (%)
92.3
Duplicates removed (%)
27.9
Number of peaks
0 (qval < 1E-05)

dm6

Number of total reads
4718133
Reads aligned (%)
92.1
Duplicates removed (%)
28.6
Number of peaks
163 (qval < 1E-05)

Base call quality data from DBCLS SRA