Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CBP

Cell type

Cell type Class
Embryo
Cell type
4-8h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E4-8
tissue/development stage
E4-8
antibody
CBP
antibody provider
Dr. Mattias Mannervik in Stockholm University

Sequenced DNA Library

library_name
E4-8_CBP_ChIPSeq_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

dm3

Number of total reads
3116193
Reads aligned (%)
58.1
Duplicates removed (%)
32.9
Number of peaks
550 (qval < 1E-05)

dm6

Number of total reads
3116193
Reads aligned (%)
56.3
Duplicates removed (%)
34.6
Number of peaks
221 (qval < 1E-05)

Base call quality data from DBCLS SRA