SRX013051
GSM408986: E12-16 CBP ChIPSeq 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CBP

Cell type

Cell type Class
Embryo
Cell type
12-16h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E12-16
tissue/development stage
E12-16
antibody
CBP
antibody provider
Dr. Mattias Mannervik in Stockholm University

Sequenced DNA Library

library_name
E12-16_CBP_ChIPSeq_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm3

Number of total reads
2867833
Reads aligned (%)
74.4
Duplicates removed (%)
30.0
Number of peaks
699 (qval < 1E-05)

dm6

Number of total reads
2867833
Reads aligned (%)
73.5
Duplicates removed (%)
31.3
Number of peaks
499 (qval < 1E-05)

Base call quality data from DBCLS SRA