SRX013044
GSM401422: L1 H3K9Ac ChIPSeq 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K9ac

Cell type

Cell type Class
Larvae
Cell type
1st instar
NA
NA

Attributes by original data submitter

Sample

source_name
L1
tissue
L1
antibody
H3K9Ac
antibody manufacturer
Abcam
antibody catalog number
ab4441
antibody lot number
420772

Sequenced DNA Library

library_name
L1_H3K9Ac_ChIPSeq_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
5034276
Reads aligned (%)
90.4
Duplicates removed (%)
5.0
Number of peaks
1371 (qval < 1E-05)

dm3

Number of total reads
5034276
Reads aligned (%)
90.7
Duplicates removed (%)
4.3
Number of peaks
1433 (qval < 1E-05)

Base call quality data from DBCLS SRA