SRX013042
GSM401420: L2 H3K9Ac ChIPSeq 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K9ac

Cell type

Cell type Class
Larvae
Cell type
2nd instar
NA
NA

Attributes by original data submitter

Sample

source_name
L2
tissue
L2
antibody
H3K9Ac
antibody manufacturer
Abcam
antibody catalog number
ab4441
antibody lot number
420772

Sequenced DNA Library

library_name
L2_H3K9Ac_ChIPSeq_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
5063524
Reads aligned (%)
83.9
Duplicates removed (%)
6.8
Number of peaks
4119 (qval < 1E-05)

dm3

Number of total reads
5063524
Reads aligned (%)
84.0
Duplicates removed (%)
6.6
Number of peaks
4029 (qval < 1E-05)

Base call quality data from DBCLS SRA