SRX013036
GSM401414: Pupae H3K9Ac ChIPSeq 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K9ac

Cell type

Cell type Class
Pupae
Cell type
Pupae
NA
NA

Attributes by original data submitter

Sample

source_name
Pupae
tissue
Pupae
antibody
H3K9Ac
antibody manufacturer
Abcam
antibody catalog number
ab4441
antibody lot number
420772

Sequenced DNA Library

library_name
Pupae_H3K9Ac_ChIPSeq_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
3824343
Reads aligned (%)
67.4
Duplicates removed (%)
4.3
Number of peaks
2608 (qval < 1E-05)

dm3

Number of total reads
3824343
Reads aligned (%)
67.6
Duplicates removed (%)
4.1
Number of peaks
2527 (qval < 1E-05)

Base call quality data from DBCLS SRA