Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me1

Cell type

Cell type Class
Embryo
Cell type
16-20h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E16-20
tissue
Embryos
time point
16-20h
antibody
H3K4me1
antibody manufacturer
Abcam
antibody catalog number
ab8895
antibody lot number
349232

Sequenced DNA Library

library_name
E16-20_H3K4Me1_ChIPSeq_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

dm6

Number of total reads
6986464
Reads aligned (%)
97.2
Duplicates removed (%)
6.8
Number of peaks
8858 (qval < 1E-05)

dm3

Number of total reads
6986464
Reads aligned (%)
97.3
Duplicates removed (%)
6.4
Number of peaks
8968 (qval < 1E-05)

Base call quality data from DBCLS SRA