SRX012398
GSM417826: HS CD4 Act 18h H3K36me3

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K36me3

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
CD4+ T cells
antigen
H3K36me3
antibody
ab9050

Sequenced DNA Library

library_name
HS_CD4_Act_18h_ H3K36me3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
7628806
Reads aligned (%)
74.4
Duplicates removed (%)
2.3
Number of peaks
54 (qval < 1E-05)

hg19

Number of total reads
7628806
Reads aligned (%)
73.9
Duplicates removed (%)
2.7
Number of peaks
49 (qval < 1E-05)

Base call quality data from DBCLS SRA