Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
CD4+ T cells
antigen
H3K4me3
antibody
ab8580

Sequenced DNA Library

library_name
HS_CD4_Act_18h_ H3K4me3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg38

Number of total reads
6976779
Reads aligned (%)
51.9
Duplicates removed (%)
3.0
Number of peaks
2630 (qval < 1E-05)

hg19

Number of total reads
6976779
Reads aligned (%)
51.2
Duplicates removed (%)
3.6
Number of peaks
2646 (qval < 1E-05)

Base call quality data from DBCLS SRA