SRX012392
GSM417820: HS CD4 Act 18h H2A.Z

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H2A.Z

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
CD4+ T cells
antigen
H2A.Z
antibody
ab4174

Sequenced DNA Library

library_name
HS_CD4_Act_18h_ H2A.Z
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
7785450
Reads aligned (%)
52.4
Duplicates removed (%)
9.8
Number of peaks
2911 (qval < 1E-05)

hg19

Number of total reads
7785450
Reads aligned (%)
52.1
Duplicates removed (%)
10.1
Number of peaks
2958 (qval < 1E-05)

Base call quality data from DBCLS SRA