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Install and launch IGV before selecting data to visualize
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Error connecting to IGV?
Analyze
For dm3
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For dm6
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: msl-3
wikigenes
PDBj
CellType: Larvae
ATCC
MeSH
RIKEN BRC
SRX011651
GSM442605: MSL3-TAP ChIP-seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
msl-3
Cell type
Cell type Class
Larvae
Cell type
Larvae
NA
NA
Attributes by original data submitter
Sample
source_name
larvae
antibody
MSL3-TAP ChIP
developmental stage
larvae
Sequenced DNA Library
library_name
MSL3-TAP ChIP-seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer
Where can I get the processing logs?
Read processing pipeline
log
dm3
Number of total reads
8490930
Reads aligned (%)
57.0
Duplicates removed (%)
3.9
Number of peaks
2406 (qval < 1E-05)
dm6
Number of total reads
8490930
Reads aligned (%)
56.0
Duplicates removed (%)
4.7
Number of peaks
1914 (qval < 1E-05)
Base call quality data from
DBCLS SRA