SRX011651
GSM442605: MSL3-TAP ChIP-seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
msl-3

Cell type

Cell type Class
Larvae
Cell type
Larvae
NA
NA

Attributes by original data submitter

Sample

source_name
larvae
antibody
MSL3-TAP ChIP
developmental stage
larvae

Sequenced DNA Library

library_name
MSL3-TAP ChIP-seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm3

Number of total reads
8490930
Reads aligned (%)
57.0
Duplicates removed (%)
3.9
Number of peaks
2406 (qval < 1E-05)

dm6

Number of total reads
8490930
Reads aligned (%)
56.0
Duplicates removed (%)
4.7
Number of peaks
1914 (qval < 1E-05)

Base call quality data from DBCLS SRA