SRX011573
GSM447584: hESC-KLF4-1a

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
KLF4

Cell type

Cell type Class
Pluripotent stem cell
Cell type
hESC H1
NA
NA

Attributes by original data submitter

Sample

source_name
embryonic stem cells
cell line
H1
chip antibody
KLF4

Sequenced DNA Library

library_name
hESC-KLF4-1a
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg19

Number of total reads
7145497
Reads aligned (%)
15.3
Duplicates removed (%)
54.9
Number of peaks
179 (qval < 1E-05)

hg38

Number of total reads
7145497
Reads aligned (%)
15.4
Duplicates removed (%)
54.5
Number of peaks
155 (qval < 1E-05)

Base call quality data from DBCLS SRA