Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
POU5F1

Cell type

Cell type Class
Pluripotent stem cell
Cell type
hESC H1
NA
NA

Attributes by original data submitter

Sample

source_name
embryonic stem cells
cell line
H1
chip antibody
OCT4

Sequenced DNA Library

library_name
hESC-Oct4-2a
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
2534199
Reads aligned (%)
9.0
Duplicates removed (%)
7.1
Number of peaks
230 (qval < 1E-05)

hg38

Number of total reads
2534199
Reads aligned (%)
9.0
Duplicates removed (%)
7.0
Number of peaks
215 (qval < 1E-05)

Base call quality data from DBCLS SRA