Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
POU5F1

Cell type

Cell type Class
Pluripotent stem cell
Cell type
hESC H1
NA
NA

Attributes by original data submitter

Sample

GEO Accession
GSM447582
cell line
H1
chip antibody
OCT4

Sequenced DNA Library

library_name
hESC-Oct4-1a
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
9048564
Reads aligned (%)
9.4
Duplicates removed (%)
2.7
Number of peaks
32 (qval < 1E-05)

hg38

Number of total reads
9048564
Reads aligned (%)
9.5
Duplicates removed (%)
2.7
Number of peaks
35 (qval < 1E-05)

Base call quality data from DBCLS SRA