SRX007045
no title

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Gonad
Cell type
Sperm
NA
NA

Attributes by original data submitter

Sample

cell type
sperm
chip antibody
H3K4Me3

Sequenced DNA Library

library_name
H3K4Me3 Lane 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
5329868
Reads aligned (%)
95.9
Duplicates removed (%)
6.1
Number of peaks
2522 (qval < 1E-05)

hg19

Number of total reads
5329868
Reads aligned (%)
95.0
Duplicates removed (%)
8.2
Number of peaks
2573 (qval < 1E-05)

Base call quality data from DBCLS SRA