SRX005639
no title

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
mab-5

Cell type

Cell type Class
Larvae
Cell type
L3
NA
NA

Attributes by original data submitter

Sample

chip antibody
anti-GFP to MAB-5
genotype
mab-5 transgenic
growth stage
L3
strain
OP26

Sequenced DNA Library

library_name
MAB-5 L3 replicate 2 GFP
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads
5286180
Reads aligned (%)
36.4
Duplicates removed (%)
11.4
Number of peaks
2200 (qval < 1E-05)

ce10

Number of total reads
5286180
Reads aligned (%)
36.4
Duplicates removed (%)
11.4
Number of peaks
2200 (qval < 1E-05)

Base call quality data from DBCLS SRA