SRX005388
no title

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Blood
Cell type
CD8+ T cells
NA
NA

Attributes by original data submitter

Sample

antibody
Chromatin IP against H3K4me3
cell type
memory CD8 T cells

Sequenced DNA Library

library_name
memory-CD8-TEM-H3K4me3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
5497675
Reads aligned (%)
60.2
Duplicates removed (%)
3.7
Number of peaks
5279 (qval < 1E-05)

hg19

Number of total reads
5497675
Reads aligned (%)
59.5
Duplicates removed (%)
4.0
Number of peaks
5258 (qval < 1E-05)

Base call quality data from DBCLS SRA