SRX005160
no title

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K9me1

Cell type

Cell type Class
Blood
Cell type
CD36+
NA
NA

Attributes by original data submitter

Sample

cell type
CD36+ primary hematopoietic stem cells/progenitor cells (HSCs/HPCs)cells
chip antibody
H3K9me1

Sequenced DNA Library

library_name
CD36-H3K9me1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
24869601
Reads aligned (%)
59.7
Duplicates removed (%)
13.3
Number of peaks
159 (qval < 1E-05)

hg19

Number of total reads
24869601
Reads aligned (%)
59.6
Duplicates removed (%)
13.4
Number of peaks
150 (qval < 1E-05)

Base call quality data from DBCLS SRA