Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Blood
Cell type
Hematopoietic Stem Cells
MeSH Description
Progenitor cells from which all blood cells derived. They are found primarily in the bone marrow and also in small numbers in the peripheral blood.

Attributes by original data submitter

Sample

cell type
CD133+ primary hematopoietic stem cells/progenitor cells (HSCs/HPCs)cells
chip antibody
PolII

Sequenced DNA Library

library_name
CD133-PolII
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg38

Number of total reads
8499598
Reads aligned (%)
48.3
Duplicates removed (%)
2.1
Number of peaks
780 (qval < 1E-05)

hg19

Number of total reads
8499598
Reads aligned (%)
47.9
Duplicates removed (%)
2.1
Number of peaks
775 (qval < 1E-05)

Base call quality data from DBCLS SRA