Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H2A.Z

Cell type

Cell type Class
Blood
Cell type
Hematopoietic Stem Cells
MeSH Description
Progenitor cells from which all blood cells derived. They are found primarily in the bone marrow and also in small numbers in the peripheral blood.

Attributes by original data submitter

Sample

cell type
CD133+ primary hematopoietic stem cells/progenitor cells (HSCs/HPCs)
chip antibody
H2AZ

Sequenced DNA Library

library_name
CD133-H2AZ
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg38

Number of total reads
20945484
Reads aligned (%)
48.2
Duplicates removed (%)
21.4
Number of peaks
10987 (qval < 1E-05)

hg19

Number of total reads
20945484
Reads aligned (%)
48.0
Duplicates removed (%)
21.5
Number of peaks
11005 (qval < 1E-05)

Base call quality data from DBCLS SRA