Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Blood
Cell type
CD34+
NA
NA

Attributes by original data submitter

Sample

ENA first public
2017-01-22
ENA last update
2015-01-28
ENA-CHECKLIST
ERC000011
External Id
SAMEA3226083
INSDC center alias
Paul O'Gorman Leukaemia Research Centre
INSDC center name
Paul O'Gorman Leukaemia Research Centre
INSDC first public
2017-01-22T17:02:12Z
INSDC last update
2015-01-28T16:53:59Z
INSDC status
public
Submitter Id
LSC1 H3K27me3
cell type
CD34+CD38-
common name
human
modification
H3K27me3 ChIP
sample
CML1
sample name
LSC1 H3K27me3

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
32776847
Reads aligned (%)
54.1
Duplicates removed (%)
41.3
Number of peaks
1457 (qval < 1E-05)

hg19

Number of total reads
32776847
Reads aligned (%)
53.8
Duplicates removed (%)
41.8
Number of peaks
1525 (qval < 1E-05)

Base call quality data from DBCLS SRA