ERX690603
Illumina Genome Analyzer II sequencing

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Blood
Cell type
CD34+
NA
NA

Attributes by original data submitter

Sample

ENA first public
2017-01-22
ENA last update
2015-01-28
ENA-CHECKLIST
ERC000011
External Id
SAMEA3226076
INSDC center alias
Paul O'Gorman Leukaemia Research Centre
INSDC center name
Paul O'Gorman Leukaemia Research Centre
INSDC first public
2017-01-22T17:02:13Z
INSDC last update
2015-01-28T16:53:59Z
INSDC status
public
Submitter Id
LPC1 H3K27me3
cell type
CD34+CD38+
common name
human
modification
H3K27me3 ChIP
sample
CML1
sample name
LPC1 H3K27me3

Sequenced DNA Library

library_name
unspecified
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
33039878
Reads aligned (%)
49.4
Duplicates removed (%)
8.6
Number of peaks
6310 (qval < 1E-05)

hg19

Number of total reads
33039878
Reads aligned (%)
49.2
Duplicates removed (%)
8.9
Number of peaks
6340 (qval < 1E-05)

Base call quality data from DBCLS SRA