Antigen

Antigen Class

No description

Antigen

NA

Cell type

Cell type Class

Breast

Cell type

CAL-51

Primary Tissue

Breast

Site of Extraction

Pleura

Tissue Diagnosis

Adenocarcinoma

Sample

ENA-CHECKLIST

ERC000011

ENA-FIRST-PUBLIC

2014-05-01

ENA-LAST-UPDATE

2013-10-30

External Id

SAMEA2242498

INSDC center alias

MPIMG

INSDC center name

Max Planck Institute for Molecular Genetics

INSDC first public

2014-05-01T17:00:43Z

INSDC last update

2013-10-30T15:49:10Z

INSDC status

public

Submitter Id

21_CAL51_ATMi_R_4h_ChIP_H3K4me3

cell_line

CAL51

common name

human

sample name

21_CAL51_ATMi_R_4h_ChIP_H3K4me3

Sequenced DNA Library

library_name

I_bc_pelib_517

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

ChIP sample preparation protocol with pe adapters and barcode

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

22022921

Reads aligned (%)

99.1

Duplicates removed (%)

15.5

Number of peaks

35525 (qval < 1E-05)

hg19

Number of total reads

22022921

Reads aligned (%)

99.1

Duplicates removed (%)

15.7

Number of peaks

35613 (qval < 1E-05)