ERX2869671
Illumina HiSeq 2500 paired end sequencing

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Lung
Cell type
BEAS-2B
Primary Tissue
Lung
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

ArrayExpress-CellType
BEAS-2B
ArrayExpress-Species
Homo Sapien
ENA first public
2018-10-30
ENA last update
2018-03-09
ENA-CHECKLIST
ERC000011
External Id
SAMEA3650227
INSDC center alias
SC
INSDC center name
Wellcome Sanger Institute
INSDC first public
2018-10-30T17:02:21Z
INSDC last update
2018-03-09T09:24:49Z
INSDC status
public
Submitter Id
BEAS2B_BR1_His_Input-sc-2458626
common name
human
sample description
BEAS2B_BR1_His_Input
sample name
BEAS2B_BR1_His_Input-sc-2458626

Sequenced DNA Library

library_name
DN423860S:E5
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIP-Seq Auto

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
51821318
Reads aligned (%)
98.5
Duplicates removed (%)
7.2
Number of peaks
1406 (qval < 1E-05)

hg19

Number of total reads
51821318
Reads aligned (%)
97.5
Duplicates removed (%)
7.4
Number of peaks
558 (qval < 1E-05)

Base call quality data from DBCLS SRA