Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CTCF

Cell type

Cell type Class
Lung
Cell type
BEAS-2B
Primary Tissue
Lung
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

Alias
BEAS2B_BR1_CTCF-sc-2458619
ENA checklist
ERC000011
INSDC center alias
SC
INSDC center name
Wellcome Sanger Institute
INSDC first public
2018-10-30T17:02:22Z
INSDC last update
2018-03-09T09:26:04Z
INSDC status
public
SRA accession
ERS957369
Sample Name
ERS957369
Title
Homo sapiens
sample_description
BEAS2B_BR1_CTCF

Sequenced DNA Library

library_name
DN423860S:F4
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIP-Seq Auto

Sequencing Platform

instrument_model
Illumina HiSeq 2500

hg19

Number of total reads
52968681
Reads aligned (%)
185.9
Duplicates removed (%)
4.8
Number of peaks
680 (qval < 1E-05)

hg38

Number of total reads
52968681
Reads aligned (%)
188.1
Duplicates removed (%)
4.5
Number of peaks
1542 (qval < 1E-05)

Base call quality data from DBCLS SRA