Antigen

Antigen Class

TFs and others

Antigen

CTCF

Cell type

Cell type Class

Lung

Cell type

A549

Primary Tissue

Lung

Tissue Diagnosis

Carcinoma

Sample

Alias

A549_BR1_CTCF-sc-2458611

ENA checklist

ERC000011

INSDC center alias

SC

INSDC center name

Wellcome Sanger Institute

INSDC first public

2018-10-30T17:02:22Z

INSDC last update

2018-03-09T09:26:04Z

INSDC status

public

SRA accession

ERS957361

Sample Name

ERS957361

Title

Homo sapiens

sample_description

A549_BR1_CTCF

Sequenced DNA Library

library_name

DN423860S:F3

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

ChIP-Seq Auto

Sequencing Platform

instrument_model

Illumina HiSeq 2500

hg19

Number of total reads

48836801

Reads aligned (%)

139.5

Duplicates removed (%)

28.5

Number of peaks

38289 (qval < 1E-05)

hg38

Number of total reads

48836801

Reads aligned (%)

141.1

Duplicates removed (%)

28.3

Number of peaks

39087 (qval < 1E-05)