Antigen

Antigen Class

TFs and others

Antigen

CTCF

Cell type

Cell type Class

Lung

Cell type

A549

Primary Tissue

Lung

Tissue Diagnosis

Carcinoma

Sample

ArrayExpress-CellType

A549

ArrayExpress-Immunoprecipitate

CTCF

ArrayExpress-Species

Homo Sapien

ENA first public

2018-10-30

ENA last update

2018-03-09

ENA-CHECKLIST

ERC000011

External Id

SAMEA3650212

INSDC center alias

SC

INSDC center name

Wellcome Sanger Institute

INSDC first public

2018-10-30T17:02:22Z

INSDC last update

2018-03-09T09:26:04Z

INSDC status

public

Submitter Id

A549_BR1_CTCF-sc-2458611

common name

human

sample description

A549_BR1_CTCF

sample name

A549_BR1_CTCF-sc-2458611

Sequenced DNA Library

library_name

ERROR: cannot retrieve data from NCBI: too many requests

library_strategy

ERROR: cannot retrieve data from NCBI: too many requests

library_source

ERROR: cannot retrieve data from NCBI: too many requests

library_selection

ERROR: cannot retrieve data from NCBI: too many requests

library_construction_protocol

ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model

ERROR: cannot retrieve data from NCBI: too many requests

cycle_sequence

ERROR: cannot retrieve data from NCBI: too many requests

cycle_count

ERROR: cannot retrieve data from NCBI: too many requests

flow_sequence

ERROR: cannot retrieve data from NCBI: too many requests

flow_count

ERROR: cannot retrieve data from NCBI: too many requests

key_sequence

ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads

48836801

Reads aligned (%)

139.5

Duplicates removed (%)

28.5

Number of peaks

38289 (qval < 1E-05)

hg38

Number of total reads

48836801

Reads aligned (%)

141.1

Duplicates removed (%)

28.3

Number of peaks

39087 (qval < 1E-05)