ERX2868939
Illumina HiSeq 2500 paired end sequencing

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

ArrayExpress-SPECIES
Homo sapiens
ENA first public
2018-10-30
ENA last update
2018-10-29
ENA-CHECKLIST
ERC000011
External Id
SAMEA5048499
INSDC center alias
SC
INSDC center name
Wellcome Sanger Institute
INSDC first public
2018-10-30T14:14:49Z
INSDC last update
2018-10-29T09:58:24Z
INSDC status
public
Submitter Id
bb2c6f80-011a-11e8-a818-68b59976a384
common name
human
sample name
bb2c6f80-011a-11e8-a818-68b59976a384
subject id
dg_cttv0207297995

Sequenced DNA Library

library_name
NT1289237D
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Nextera dual index qPCR only

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
102563942
Reads aligned (%)
94.6
Duplicates removed (%)
43.1
Number of peaks
40400 (qval < 1E-05)

hg19

Number of total reads
102563942
Reads aligned (%)
94.4
Duplicates removed (%)
43.2
Number of peaks
40265 (qval < 1E-05)

Base call quality data from DBCLS SRA