Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

ArrayExpress-SPECIES
Homo sapiens
ENA first public
2018-10-30
ENA last update
2018-10-29
ENA-CHECKLIST
ERC000011
External Id
SAMEA5048488
INSDC center alias
SC
INSDC center name
Wellcome Sanger Institute
INSDC first public
2018-10-30T14:14:49Z
INSDC last update
2018-10-29T09:58:17Z
INSDC status
public
Submitter Id
6de54ac2-5b10-11e7-bff3-68b59976a384
common name
human
sample name
6de54ac2-5b10-11e7-bff3-68b59976a384
subject id
dg_cttv0206994289

Sequenced DNA Library

library_name
NT1101311K
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Nextera dual index qPCR only

Sequencing Platform

instrument_model
Illumina HiSeq 2500

hg38

Number of total reads
55276048
Reads aligned (%)
93.5
Duplicates removed (%)
74.7
Number of peaks
20328 (qval < 1E-05)

hg19

Number of total reads
55276048
Reads aligned (%)
93.1
Duplicates removed (%)
75.1
Number of peaks
20046 (qval < 1E-05)

Base call quality data from DBCLS SRA