Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CTCF

Cell type

Cell type Class
Blood
Cell type
KU812
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

Alias
2ef6a26e-fcfc-11e7-8f97-3c4a9275d6c8
ENA checklist
ERC000011
INSDC center alias
SC
INSDC center name
Wellcome Sanger Institute
INSDC first public
2018-10-30T17:02:45Z
INSDC last update
2018-10-29T10:01:22Z
INSDC status
public
SRA accession
ERS2860427
SUBJECT_ID
dg_cttv0207282418
Sample Name
ERS2860427
Title
Ku812_BR2_CTCF

Sequenced DNA Library

library_name
DN518363E:F7
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIP-Seq Auto

Sequencing Platform

instrument_model
Illumina HiSeq 2500

hg19

Number of total reads
47454002
Reads aligned (%)
182.4
Duplicates removed (%)
2.0
Number of peaks
62923 (qval < 1E-05)

hg38

Number of total reads
47454002
Reads aligned (%)
184.6
Duplicates removed (%)
1.6
Number of peaks
65519 (qval < 1E-05)

Base call quality data from DBCLS SRA