Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CTCF

Cell type

Cell type Class
Blood
Cell type
HEL 92.1.7
NA
NA

Attributes by original data submitter

Sample

Alias
f6a3fb40-9128-11e6-95da-3c4a9275d6c8
ENA checklist
ERC000011
INSDC center alias
SC
INSDC center name
Wellcome Sanger Institute
INSDC first public
2018-10-30T17:02:45Z
INSDC last update
2018-10-29T11:04:32Z
INSDC status
public
SRA accession
ERS2862050
Sample Name
ERS2862050
Title
HEL9217_BR2_Rep_CTCF
sample_description
HEL9217_BR2_Rep_CTCF

Sequenced DNA Library

library_name
DN470460T:E1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIP-Seq Auto

Sequencing Platform

instrument_model
Illumina HiSeq 2500

hg19

Number of total reads
63178215
Reads aligned (%)
160.4
Duplicates removed (%)
17.2
Number of peaks
53499 (qval < 1E-05)

hg38

Number of total reads
63178215
Reads aligned (%)
162.5
Duplicates removed (%)
16.9
Number of peaks
55111 (qval < 1E-05)

Base call quality data from DBCLS SRA