Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CTCF

Cell type

Cell type Class
Lung
Cell type
BEAS-2B
Primary Tissue
Lung
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

ArrayExpress-CellType
BEAS2B
ArrayExpress-Immunoprecipitate
CTCF
ArrayExpress-Species
Homo sapiens
ENA first public
2018-10-30
ENA last update
2018-10-29
ENA-CHECKLIST
ERC000011
External Id
SAMEA5050325
INSDC center alias
SC
INSDC center name
Wellcome Sanger Institute
INSDC first public
2018-10-30T17:02:45Z
INSDC last update
2018-10-29T11:04:31Z
INSDC status
public
Submitter Id
f6832cd0-9128-11e6-95da-3c4a9275d6c8
common name
human
sample description
BEAS2B_CTCF_Rep_BR2
sample name
f6832cd0-9128-11e6-95da-3c4a9275d6c8

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
84314496
Reads aligned (%)
98.5
Duplicates removed (%)
31.0
Number of peaks
40803 (qval < 1E-05)

hg19

Number of total reads
84314496
Reads aligned (%)
97.7
Duplicates removed (%)
31.3
Number of peaks
40016 (qval < 1E-05)

Base call quality data from DBCLS SRA