ERX2587854
Illumina HiSeq 2000 sequencing

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

ENA first public
2018-05-15
ENA last update
2018-05-09
ENA-CHECKLIST
ERC000011
External Id
SAMEA4652620
INSDC center alias
Center for Hematology and Regenerative Medicine
INSDC center name
Center for Hematology and Regenerative Medicine
INSDC first public
2018-05-15T17:02:59Z
INSDC last update
2018-05-09T09:04:03Z
INSDC status
public
Submitter Id
MM39
common name
human
sample name
MM39

Sequenced DNA Library

library_name
unspecified
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
30832159
Reads aligned (%)
99.0
Duplicates removed (%)
7.2
Number of peaks
1104 (qval < 1E-05)

hg19

Number of total reads
30832159
Reads aligned (%)
98.2
Duplicates removed (%)
8.7
Number of peaks
1150 (qval < 1E-05)

Base call quality data from DBCLS SRA