ERX2587818
Illumina HiSeq 2000 sequencing

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

ENA first public
2018-05-15
ENA last update
2018-05-09
ENA-CHECKLIST
ERC000011
External Id
SAMEA4652584
INSDC center alias
Center for Hematology and Regenerative Medicine
INSDC center name
Center for Hematology and Regenerative Medicine
INSDC first public
2018-05-15T17:02:59Z
INSDC last update
2018-05-09T09:04:02Z
INSDC status
public
Submitter Id
MM03
common name
human
sample name
MM03

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
12493078
Reads aligned (%)
97.2
Duplicates removed (%)
8.7
Number of peaks
23364 (qval < 1E-05)

hg19

Number of total reads
12493078
Reads aligned (%)
96.9
Duplicates removed (%)
8.8
Number of peaks
23433 (qval < 1E-05)

Base call quality data from DBCLS SRA