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For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: BCL11A
wikigenes
PDBj
CellType: Lung cancer
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
ERX2260043
Illumina HiSeq 2500 paired end sequencing
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
BCL11A
Cell type
Cell type Class
Lung
Cell type
Lung cancer
NA
NA
Attributes by original data submitter
Sample
ArrayExpress-CellType
Lung
ArrayExpress-DevelopmentalStage
Cancer cells
ArrayExpress-Immunoprecipitate
BCL11A
ArrayExpress-OrganismPart
Lung
ArrayExpress-Phenotype
Cancer cells
ArrayExpress-Sex
male
ArrayExpress-Species
Homo sapiens
ENA first public
2017-11-28
ENA last update
2016-10-31
ENA-CHECKLIST
ERC000011
External Id
SAMEA4527695
INSDC center alias
SC
INSDC center name
Wellcome Sanger Institute
INSDC first public
2017-11-28T17:02:40Z
INSDC last update
2016-10-31T11:32:13Z
INSDC status
public
Submitter Id
2f8a0500-83c1-11e6-ad90-3c4a9275d6c8
common name
human
sample description
LK2_CONT_11A
sample name
2f8a0500-83c1-11e6-ad90-3c4a9275d6c8
Sequenced DNA Library
library_name
DN468513T:A1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIP-Seq Auto
Sequencing Platform
instrument_model
Illumina HiSeq 2500
Where can I get the processing logs?
Read processing pipeline
log
hg19
Number of total reads
47806427
Reads aligned (%)
141.8
Duplicates removed (%)
27.0
Number of peaks
530 (qval < 1E-05)
hg38
Number of total reads
47806427
Reads aligned (%)
144.0
Duplicates removed (%)
26.6
Number of peaks
1146 (qval < 1E-05)
Base call quality data from
DBCLS SRA