Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CHD8

Cell type

Cell type Class
Unclassified
Cell type
Unclassified
NA
NA

Attributes by original data submitter

Sample

Alias
4929c2b0-d3f5-11e5-88b1-3c4a9275d6c6
ENA checklist
ERC000011
INSDC center name
SC
INSDC first public
2017-10-31T10:19:10Z
INSDC last update
2016-07-12T16:58:40Z
INSDC status
public
SRA accession
ERS1246891
Sample Name
ERS1246891
Title
MSCHD8
sample_description
CHD8 chipseq

Sequenced DNA Library

library_name
DN457801P:H1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIP-Seq Auto

Sequencing Platform

instrument_model
Illumina HiSeq 2500

hg19

Number of total reads
44833491
Reads aligned (%)
14.6
Duplicates removed (%)
90.3
Number of peaks
116 (qval < 1E-05)

hg38

Number of total reads
44833491
Reads aligned (%)
15.4
Duplicates removed (%)
89.8
Number of peaks
144 (qval < 1E-05)

Base call quality data from DBCLS SRA