Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Embryo
Cell type
20-24h embryos
NA
NA

Attributes by original data submitter

Sample

Alias
A716_H3K27me3_st17_EzTS_shifted_rep2
Description
H3K27me3 ChIP (Diagenode, C15410195 A1811-001P) corresponding Input A716_Input_st17_EzTS_shifted_rep2
ENA checklist
ERC000011
INSDC center alias
MAX PLANCK INSTITUTE OF IMMUNOBIOLOGY AND EPIGENETICS
INSDC center name
MAX PLANCK INSTITUTE OF IMMUNOBIOLOGY AND EPIGENETICS
INSDC first public
2017-07-13T17:03:06Z
INSDC last update
2017-07-12T10:06:28Z
INSDC status
public
SRA accession
ERS1799718
Sample Name
ERS1799718
Title
H3K27me3_st17_EzTS_shifted_rep2
dev_stage
embryos st 17

Sequenced DNA Library

library_name
unspecified
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
NEBNext Ultra

Sequencing Platform

instrument_model
Illumina HiSeq 3000

dm3

Number of total reads
22468355
Reads aligned (%)
94.1
Duplicates removed (%)
20.7
Number of peaks
1691 (qval < 1E-05)

dm6

Number of total reads
22468355
Reads aligned (%)
93.7
Duplicates removed (%)
21.4
Number of peaks
1686 (qval < 1E-05)

Base call quality data from DBCLS SRA