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For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For dm6
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For dm3
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: NA
wikigenes
PDBj
CellType: Mitotic cycle 17
ATCC
MeSH
RIKEN BRC
ERX2075301
Illumina HiSeq 3000 paired end sequencing
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
No description
Antigen
NA
Cell type
Cell type Class
Embryo
Cell type
Mitotic cycle 17
NA
NA
Attributes by original data submitter
Sample
ENA first public
2017-07-13
ENA last update
2017-07-12
ENA-CHECKLIST
ERC000011
External Id
SAMEA104140700
INSDC center alias
MAX PLANCK INSTITUTE OF IMMUNOBIOLOGY AND EPIGENETICS
INSDC center name
MAX PLANCK INSTITUTE OF IMMUNOBIOLOGY AND EPIGENETICS
INSDC first public
2017-07-13T17:03:06Z
INSDC last update
2017-07-12T10:06:28Z
INSDC status
public
Submitter Id
A716_H3K27me3_st17_EzTS_shifted_rep2
common name
fruit fly
dev stage
embryos st 17
sample name
A716_H3K27me3_st17_EzTS_shifted_rep2
Sequenced DNA Library
library_name
unspecified
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
NEBNext Ultra
Sequencing Platform
instrument_model
Illumina HiSeq 3000
Where can I get the processing logs?
Read processing pipeline
log
dm6
Number of total reads
22468355
Reads aligned (%)
93.7
Duplicates removed (%)
21.4
Number of peaks
1686 (qval < 1E-05)
dm3
Number of total reads
22468355
Reads aligned (%)
94.1
Duplicates removed (%)
20.7
Number of peaks
1691 (qval < 1E-05)
Base call quality data from
DBCLS SRA