Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Embryo
Cell type
Mitotic cycle 14
NA
NA

Attributes by original data submitter

Sample

Alias
A716_H3K27me3_c14_EzTS_29_rep1
Description
H3K27me3 ChIP (Diagenode, C15410195 A1811-001P) corresponding Input A716_Input_c14_EzTS_29_rep1
ENA checklist
ERC000011
INSDC center alias
MAX PLANCK INSTITUTE OF IMMUNOBIOLOGY AND EPIGENETICS
INSDC center name
MAX PLANCK INSTITUTE OF IMMUNOBIOLOGY AND EPIGENETICS
INSDC first public
2017-07-13T17:03:01Z
INSDC last update
2017-07-12T10:10:59Z
INSDC status
public
SRA accession
ERS1799716
Sample Name
ERS1799716
Title
H3K27me3_c14_EzTS_29_rep1
dev_stage
embryos cycle 14/st 5

Sequenced DNA Library

library_name
unspecified
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
NEBNext Ultra

Sequencing Platform

instrument_model
Illumina HiSeq 3000

dm3

Number of total reads
25450096
Reads aligned (%)
89.8
Duplicates removed (%)
37.0
Number of peaks
4149 (qval < 1E-05)

dm6

Number of total reads
25450096
Reads aligned (%)
89.3
Duplicates removed (%)
38.6
Number of peaks
2024 (qval < 1E-05)

Base call quality data from DBCLS SRA